England scored through Anthony Gordon in the 55th minute and held the lead for half an hour.
Fernandez struck a brilliant equaliser in the 85th minute, after Messi picked him out near the edge of the penalty area.
Lautaro Martinez then won the game in stoppage time with a header from Messi’s cross.
Between Gordon’s goal and Argentina’s equaliser, England had only 12% of the ball which meant they spent most of the second half defending in deep positions.
It became a tussle of Argentina’s attack versus England’s defence, which lived a charmed life for a while.
Argentina persisted though, with Messi exploiting weaknesses in England’s structure and flaws in individual players’ habits to inspire his side’s comeback.
After getting some joy against Messi in the early stages of the game, Anderson’s front-footed approach became less effective with Messi adapting on the fly to his direct opponent’s playing style.
In fact, Messi began to use Anderson’s aggression against him. He held the ball for as long as possible, drawing the 23-year-old out, before flicking the ball around the corner for team-mates in the knowledge there was now space to attack in the zone Anderson had vacated.
